So, this is still not fixed ;(
You could populate the missing roles to the superadmin using:
INSERT into ps_access (id_profile, id_authorization_role) SELECT 1, par.id_authorization_role FROM ps_authorization_role par WHERE par.id_authorization_role NOT IN ( SELECT pa.id_authorization_role FROM ps_access pa WHERE pa.id_profile = 1 )
not sure why this is not at the 1-click module yet